生物如何演化去佔據地球上各式各樣的生態區位是相當有趣的問題。為了瞭解這個問題，我們對鳥類（和其他動物）的親緣地理學，適應性演化學，基因體學和行為生態學進行研究。因為鳥類演化出了一系列特殊的形態和行為特徵，所以我們選擇它們為研究對象。同時，誰能不對這些一窗之隔的繽紛飛羽多看一眼。

期刊論文

1. Chen, Yu-Chi, Kuo, Hao-Chih, Lo, Wen-Sui & Hung, Chih-Ming*, 2020, “Avian phenotypic convergence is subject to low genetic constraints based on genomic evidence”, BMC EVOLUTIONARY BIOLOGY, 20, 147. (SCIE) (IF: 3.027; SCIE ranking: 42.9%,40.9%)
2. Chen, C.-Y., Chen, C.-K., Chen, Y.-Y., Fang, A., Shaw, G.T.-W., Hung, C.-M.* & Wang, D.*, 2020, “Maternal gut microbes shape the early-life assembly of gut microbiota in passerine chicks via nests”, MICROBIOME, 8, 129. (SCIE) (IF: 9.133; SCIE ranking: 7.9%)
3. Feng Dong, Chih-Ming Hung*, Xiao-Jun Yang*, 2020, “Secondary contact after allopatric divergence explains avian speciation and T high species diversity in the Himalayan-Hengduan Mountains”, MOLECULAR PHYLOGENETICS AND EVOLUTION, 143, 106671. (SCIE) (IF: 4.412; SCIE ranking: 20.4%,21.8%,19.9%)
4. Nguyen, H. N., Hung, C. M., Yang, M. Y., & Lin, S. M.*, 2020, “Sympatric competitors have driven the evolution of temporal activity patterns in Cnemaspis geckos in Southeast Asia”, SCIENTIFIC REPORTS, 10: 27. (SCIE) (IF: 4.122; SCIE ranking: 18.8%)
5. Huang, C.-C., Chen, Y.-Y., Fang, Y.-T., Chen, Y.-C. and Hung, C.-M.*, 2019, “Generating brain matrices for zebra finch brain sectioning using three-dimensional printing technology”, JOURNAL OF NEUROSCIENCE METHODS, 327, 108399. (SCIE) (IF: 2.668; SCIE ranking: 59%,39.2%)
6. Yang, S.-F., Lu, C.-W., Yao, C.-T. and Hung, C.-M.*, 2019, “To Trim or Not to Trim: Effects of Read Trimming on the De Novo Genome Assembly of a Widespread East Asian Passerine, the Rufous-Capped Babbler (Cyanoderma ruficeps Blyth)”, GENES, 10(10), 737. (SCIE) (IF: 3.191; SCIE ranking: 39.8%)
7. Yu-Chi Chen, Masoud Nazarizadeh, Fu-Min Lei, Xiao-Jun Yang, Cheng-Te Yao, Feng Dong, Lu Dong, Fa-Sheng Zou, Sergei V. Drovetski, Yang Liu, Chun-Cheng Huang & Chih-Ming Hung*, 2019, “The niches of nuthatches affect their lineage evolution differently across latitude”, MOLECULAR ECOLOGY, 28(4), 803-817. (SCIE) (IF: 6.086; SCIE ranking: 13.4%,12.5%,5.9%)
8. Hung N. Nguyen, Chia-Wei Lu, Jui-Hua Chu, Larry L. Grismer, Chih-Ming Hung* and Si-Min Lin*, 2019, “Historical demography of four gecko species specializing in boulder cave habitat – its implications in the evolutionary dead end hypothesis and conservation”, MOLECULAR ECOLOGY, 28(4), 772-784. (SCIE) (IF: 6.086; SCIE ranking: 13.4%,12.5%,5.9%)
9. Lai, Y.T., Yeung, C.K., Omland, K.E., Pang, E.L., Hao, Y., Liao, B.Y., Cao, H.F., Zhang B.W. Yeh, C.F., Hung, C.M., Hung H.Y., Yang, M.Y., Liang W., Hsu, Y.C. Yao, C.T., Dong, L., Lin, K. & Li, S.H.*, 2019, “Standing genetic variation as the predominant source for adaptation of a songbird.”, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 116(6), 2152-2157. (SCIE) (IF: 9.504; SCIE ranking: 7.8%)
10. Jhih-Syuan Wang & Chih-Ming Hung*, 2019, “Barn Swallow Nest Predation by a Recent Urban Invader, the Taiwan Whistling Thrush – Implications for the Evolution of Urban Avian Communities”, ZOOLOGICAL STUDIES, 58, 1. (SCIE) (IF: 1.008; SCIE ranking: 52.1%)
11. Chih-Ming Hung*, Robert M. Zink and Shou-Hsien Li, 2018, “Can genomic variation explain the extinction of the passenger pigeon?”, JOURNAL OF AVIAN BIOLOGY, 49(8), UNSP e01858. (SCIE) (IF: 2.228; SCIE ranking: 12.5%)
12. Yi-Ting Fang, Mao-Ning Tuanmu* & Chih-Ming Hung*, 2018, “Asynchronous evolution of interdependent nest characters across the avian phylogeny”, NATURE COMMUNICATIONS, 9, 1863. (SCIE) (IF: 12.353; SCIE ranking: 4.7%)
13. H.L. Mays*, C.-M. Hung, P.-J. Shaner,J. Denvir, M. Justice, S.-F. Yang, T.L. Roth, D.A. Oheler, J. Fan, S. Rekulapally and D.A. Primerano, 2018, “Genomic analysis of demographic history and ecological niche modeling in the endangered Sumatran Rhinoceros Dicerorhinus sumatrensis”, CURRENT BIOLOGY, 28, 70-76. (SCIE) (IF: 8.851; SCIE ranking: 6.6%,10%)
14. Feng Dong†, Chih-Ming Hung†, Xin-Lei li, Jian-Yun Gao, Qiang Zhang, Fei Wu, Fu-Min Lei, Shou-Hsien Li and Xiao-Jun Yang [†equal contribution], 2017, “Ice age unfrozen: severe effect of the last interglacial, not glacial, climate change on East Asian avifauna”, BMC Evolutionary Biology, 17(1), 244. (SCIE) (IF: 3.221; SCIE ranking: 35.4%,38.9%)
15. Chih-Ming Hung*, Sergei V. Drovetski and Robert M. Zink, 2017, “The roles of ecology, behavior and effective population size in the evolution of a community”, MOLECULAR ECOLOGY, 26, 3775-3784. (SCIE) (IF: 6.086; SCIE ranking: 13.4%,12.5%,5.9%)
16. Chih-Ming Hung*, Sergei V. Drovetski and Robert M. Zink, 2016, “Matching loci surveyed to questions asked in phylogeography”, PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 283, 20152340. (SCIE) (IF: 4.94; SCIE ranking: 10.6%,16.7%,11.1%)
17. Chih-Ming Hung, Ai-Yun Yu, Yu-Ting Lai & Pei-Jen L. Shaner*, 2016, “Developing informative microsatellite makers for non-model species using reference mapping against a model species’ genome”, Scientific Reports, 6, 23087. (SCIE) (IF: 4.259; SCIE ranking: 15.6%)

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